CDS

Accession Number TCMCG016C13213
gbkey CDS
Protein Id OMO78851.1
Location complement(join(118938..119041,119164..119363,119463..119608,119714..119764,119852..119951,120036..120103))
Organism Corchorus capsularis
locus_tag CCACVL1_14081

Protein

Length 222aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01010515.1
Definition MADS-box transcription factor 3 [Corchorus capsularis]
Locus_tag CCACVL1_14081

EGGNOG-MAPPER Annotation

COG_category K
Description transcription factor
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03000        [VIEW IN KEGG]
KEGG_ko ko:K04454        [VIEW IN KEGG]
ko:K09260        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04010        [VIEW IN KEGG]
ko04013        [VIEW IN KEGG]
ko04022        [VIEW IN KEGG]
ko04371        [VIEW IN KEGG]
ko04921        [VIEW IN KEGG]
ko05202        [VIEW IN KEGG]
ko05418        [VIEW IN KEGG]
map04010        [VIEW IN KEGG]
map04013        [VIEW IN KEGG]
map04022        [VIEW IN KEGG]
map04371        [VIEW IN KEGG]
map04921        [VIEW IN KEGG]
map05202        [VIEW IN KEGG]
map05418        [VIEW IN KEGG]
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0003002        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0007389        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009653        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009908        [VIEW IN EMBL-EBI]
GO:0010093        [VIEW IN EMBL-EBI]
GO:0010097        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0048367        [VIEW IN EMBL-EBI]
GO:0048437        [VIEW IN EMBL-EBI]
GO:0048438        [VIEW IN EMBL-EBI]
GO:0048443        [VIEW IN EMBL-EBI]
GO:0048444        [VIEW IN EMBL-EBI]
GO:0048448        [VIEW IN EMBL-EBI]
GO:0048449        [VIEW IN EMBL-EBI]
GO:0048455        [VIEW IN EMBL-EBI]
GO:0048466        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048646        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048827        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0090567        [VIEW IN EMBL-EBI]
GO:0090696        [VIEW IN EMBL-EBI]
GO:0090697        [VIEW IN EMBL-EBI]
GO:0090698        [VIEW IN EMBL-EBI]
GO:0090701        [VIEW IN EMBL-EBI]
GO:0099402        [VIEW IN EMBL-EBI]
GO:1905392        [VIEW IN EMBL-EBI]
GO:1905393        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCAGGAGTTTCAGCAAGAGATTGTTAAATGCAAGTCCCGTATAGTGGATATGGAGAAACAACTAAGGATCTTTGAAGGTGATGCTTCCGAAATCACAGCCTTGGATCAGGCTGAGTACCACGAGCATATCCTAGAGGAAACGCTGAAACAAGTGCGTTTACAAAAGCAAGTTTTACAGGAAAAGTATAATTCTCCTGGTCCAGCGCCAACTACACAGGTACATCTTCCTTCAGAGACTCCAGATGTAAGTGGCTTTCTTACAGGAAGTTCAAGCAATGGTATTTTAGATTGGATGGCGCCCCAGCGAGACCCACAAATTCAGATTTTGAACTTTTTGGATTCAAATGGTCTTCTTCCTCCTAGTGATCAGACACAAACTGTAGCTGAAATCTTACCACCACCATCGCCACAACCAACTCTCCTTCATGGGGAAGAAATAAATGTTGAGGAACAGTTGAGCCCCAGATCAAGTGGTTTAGAGAGCGACAATAATGTGCAACGTCCTGAGTTTGGACAAATTATTGATGTCAACATGTCCCCTTGGACTCAACTCTATCCAACAGTGGCAGGGAATGATCCATTTCCAGATGGACAGCCACTCCTCGAACTATACTTGTCTCAGTTTGCACAATCAGCCATGTCTACGATGAATCAGCACCATACATGA
Protein:  
MQEFQQEIVKCKSRIVDMEKQLRIFEGDASEITALDQAEYHEHILEETLKQVRLQKQVLQEKYNSPGPAPTTQVHLPSETPDVSGFLTGSSSNGILDWMAPQRDPQIQILNFLDSNGLLPPSDQTQTVAEILPPPSPQPTLLHGEEINVEEQLSPRSSGLESDNNVQRPEFGQIIDVNMSPWTQLYPTVAGNDPFPDGQPLLELYLSQFAQSAMSTMNQHHT